The R package EchoviewR for automated processing of active acoustic data using Echoview
Harrison L-MK, Cox MJ, Skaret G and Harcourt R (2015) The R package EchoviewR for automated processing of active acoustic data using Echoview. Front. Mar. Sci. 2:15. doi: 10.3389/fmars.2015.00015 | Find with Google Scholar »
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Dear all,
Please join me today at 4pm in the E8A tearoom to celebrate Mark Westoby’s 40th anniversary in the Department. There will be lovely drinks and nibbles!
cheerio
Mariella
General News and Announcements
Department Meeting – March 3, 2015
We are back into the groove of having Department meetings on the first Tuesday of the month. I want to keep this meeting trim with a discussion on the next academic positions for the Department. All staff (professional, academic), post-docs and higher degree research students (MREs, PhD) are cordially invited to attend Department meetings!
Agenda thus far:
- Safety update – Marita
- Learner Experience of Unit – Mariella and Kath
- What are our next hires – everyone
Seminar next week
Next Weeks Bio Dept speaker in collaboration with Climate Futures, is Rebecca Harris from UTas.
Climate projections for ecologists
Climate projections are essential for studying ecological responses to climate change, and their use is now common in ecology. However, the lack of integration between ecology and climate science has restricted understanding of the available climate data and their appropriate use. Bec will give an overview of climate model outputs and issues that need to be considered when applying projections of future climate in ecological studies. She will outline the strengths and weaknesses of available climate projections, the uncertainty associated with future projections at different spatial and temporal scales, the differences between available downscaling methods (dynamical, statistical downscaling, and simple scaling of global circulation model output), and the implications these have for ecological models. She will describe some of the changes in the Fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change (IPCC), including the new representative concentration pathways. Finally, she will highlight some of the challenges in using model projections
New to the Department
Welcome to our new Future Fellow: Ajay Narendra (ajay.narendra@mq.edu.au) who is joining the Department from the ANU. Ajay will be here in person from July 1, 2015 and until then occasionally visit the Department. Ajay will be located on the Hill with more details to follow.
If you have a new student, post-doc or visitor, please bring them past to introduce them and send me details for inclusion in the Department Matters.
Feedback on the fieldwork manual
Please provide feedback on the new field work manual to Sarah by March 6!
The Department of Biological Sciences fieldwork manual
Australian Marine Sciences Association (NSW) event at the Macquarie Art Gallery next Tuesday
We are hosting the Australian Marine Sciences Association NSW AGM at Macquarie on Tuesday evening (the 3rd of March). The event will be held at the Macquarie Art Gallery (E11A) starting at 7pm. There will be food and drinks as well as two short talks by Gemma White and Melanie Bishop highlighting the excellent marine research we do at Macquarie. Please let Josh know if you plan to come along for catering numbers (joshua.madin@mq.edu.au).
Biology Safety Alert
1. 2015 Office inspections.
The 2015 office inspections will commence in March. This year the WHS committee will be conducting them and filling in the paper work for you. The office inspection checklist that the committee will be using is attached. Please ensure your office is in good order to keep your corrective actions to a minimum.
2. Minutes of Biology WHS committee meeting held 3rd February 2015
Biology WHS Advisory Group minutes 3rd February 2015 2015 Office inspection checklist-MH
For sale
VW GOLF GTI 2012 Manual, still under New Car Warranty to April.
Laura’s daughter has moved to New York for work and has left her near new car with her to sell.
Features:
- Only 20,200 Kms
- $31,500 ono
- 5 door hatch
- 6 speed gear box
- One owner (Laura’s daughter – bought brand new)
- Always garaged
- Cloth seats (interior – as new)
- USB connection
- Alloy wheels
- Other standard factory inclusion
- Colour: black
- Serviced by VW authorised dealers
- Next service at 29,000 kms
- Enquiries: Laura Ext 8226
Philosophy Seminar: What can (and cannot) non-human animals tell us about the human mind?”
Rachael Brown (Macquarie University)
Tuesday March 3rd, 1-2pm
Rm 107, Building W6A
While it is universally accepted that non-human animal evidence has a role to play in the study of the human mind, the limits of that role are unclear. This leaves open the question of when we are justified in making claims about the human mind of the basis of such evidence, and when we are not. In my paper I respond to this question by exploring the types of inferences that cognitive, scientists, neuroscientists and psychologists make from non-human animals and their limits. Ultimately I hope to develop a general guide for how we should use non-human evidence when theorising about the human mind and a framework for assessing claims about the human mind that are reliant on non-human animal evidence.
Feel free to bring your lunch. Bring a coffee mug if you would like a tea or coffee.
Contact: Rachael Brown (rachael.brown@mq.edu.au)
A google calendar with details of other events in this series is available for viewing and subscription by following this link: http://tinyurl.com/k85h2dl
Jobs
Postdoctoral Research Fellow in Community Engaged Learning and Research
Macquarie University is seeking an enthusiastic and talented post-doctoral researcher to join our Professional and Community Engagement (PACE) Research and Evaluation Team. The research fellow will be responsible for developing a ‘theory of change’ for the PACE program. A particular objective of the position is to further knowledge and understanding of the impact PACE is having and if and how it is meeting its goals. An associated project will also seek to understand different stakeholders views of what constitutes success in PACE both by themselves and other stakeholders. For more information see http://jobs.mq.edu.au/cw/en/job/495458/postdoctoral-research-fellow-in-community-engaged-learning-and-research
Proposed changes to vessel costs
Hi All
This year we are hoping to use fuel cards for the vessels to calculate boat operation costs.
Charges will be:
Usage tarrifs (fuel inclusive) for 2015 and projects funded prior to 2015:
- Pelagica $90/day
- Sea Wasp $70/day
- Jimble $60/day
- Punt $40/day
Usage tarrifs (fuel inclusive) for 2016* and project seeking funding after March 2015:
- All boats – $40/day daily tarrif + number of engine hours used.
- Pelagica – $44/engine hour (dual engines, aka 2 x $22)
- Sea Wasp – $26/engine hour
- Jimble – $30/engine hour
* 2016 rates are provisional and may decrease depending on University policy decisions about cost recovery, but they will not increase over those listed here for 2016.
Please see the link
http://marinescience.mq.edu.au/diving/vessels_tariffs_bookings/
feel free to let me know if you have any problems
thanks Andrew
For sale
2001 Holden Barina for sale -$3500
More details and photos available at:
http://www.carsales.com.au/private/details/Holden-Barina-2001/SSE-AD-3234599/?Cr=37
or email sarah.collison@mq.edu.au
Jobs – Temporary Administrative Assistant at SIMS
see attached
Admin Assistant (temp) PD Final
Working on imported biological material?
Have a look at the Biosafety Factsheet from the Department of Agriculture attached
Dept of Ag biosecurity requirement_fact sheet
X-ray diffraction workshop at UWS
Course/Training: Introduction to X-ray diffraction (XRD)
When: Tuesday 24th of February 2015
Where: Parramatta North Campus room LY.LG.04
Start: 10am
The program will be:
- 10 to 11am Introduction to XRD
- 11 to 11.30am Break – Morning tea
- 11.30am to 12.30pm Instrumentation – hands on demonstration of Bruker XRD
- 12.30pm to 1pm Identifying and Pattern Indexing
- 1pm to 2pm Break – Lunch
- 2pm to 3pm Hands on processing data. Hands on demonstration of XRD Software
- 3pm to 3.30pm Break – Afternoon tea
- 3.30pm to 4.30pm Sample Preparation, phase analysis, other analytical methods (Lattice parameter etc)
- 4.30 to 5pm Conclusion and wrap up
Please email Richard.Wuhrer@uws.edu.au if you would like to attend.
Workshop on Nuclear Magnetic Resonance/Imaging and their Applications
Date and time: Monday 30th March 2015, 1:00 pm – 4:30 pm
Where: UWS Campbelltown Campus, Building 30, Room G.213,
– Please register to attend the workshop (www.uws.edu.au/nanosymposium ) as light refreshments will be provided during the break.
- 1:00 pm – The basic concepts of NMR/MRI.
- 2:00 pm – NMR spectroscopy and its applications to industry and medicine.
- 3:00 pm – Afternoon Tea
- 3:30pm – NMR Imaging (MRI) and its applications to industry and medicine.
- Date and time: Monday 30th March 2015, 1:00 pm – 4:30 pm
- Where: UWS Campbelltown Campus, Building 30, Room G.213,
- Cost: Free
- Further information is available from;
- Dr Bahman Ghadirian at b.ghadirian@uws.edu.au
Change to Animal Facilities Committee
Macquarie University has a number of animal facilities, each with a separate identity. To represent the unified nature of these facilities, the Office of the Deputy Vice-Chancellor (Research) and the Animal Facilities Committee have decided to give these facilities a new identity that more accurately describes their joint functions.
The Vice Chancellor has approved the new name for the facilities to take effect from Tuesday the 17th of February 2015. Macquarie University’s Animal Facilities will become the Macquarie Animal Research Services (MARS).
BBVA Foundation Frontiers of Knowledge Awards
‘The BBVA Foundation, in collaboration with the Spanish National Research Council(CSIC), is pleased to announce the eighth edition of the BBVA Foundation Frontiers of Knowledge Awards, and to invite you to participate by nominating a candidate or candidates through the institution to which you belong, following the instructions provided in the accompanying call conditions. Further information can be found at the foundation website: www.fbbva/es/awards
New Publications
Comparison of the cross-shelf phytoplankton distribution of two oceanographically distinct regions off Australia
Armbrecht, L. H., Thompson, P. A., Wright, S. W., Schaeffer, A., Roughan, M. Henderiks, J., Armand, L. K., 2015. Comparison of the cross-shelf phytoplankton distribution of two oceanographically distinct regions off Australia. Journal of Marine Systems 148, 26-38. | Find with Google Scholar »A test of an optimal stomatal conductance scheme within the CABLE Land Surface Model
De Kauwe, M.G., Kala, J., Lin, Y.-S., Pitman, A. J., Medlyn, B. E., Duursma, R. A., Abramowitz, G., Wang, Y.-P. and Miralles, D. G. (2015) A test of an optimal stomatal conductance scheme within the CABLE Land Surface Model. Geoscientific Model Development, 8, 431-452 | Find with Google Scholar »Dissecting the variation of a visual trait: the proximate basis of UV-Visible reflectance in crab spiders (Thomisidae)
Gawryszewski FM, Birch D, Kemp DJ, Herberstein ME, 2015. Dissecting the variation of a visual trait: the proximate basis of UV-Visible reflectance in crab spiders (Thomisidae). Functional Ecology 29:44-54. doi: 10.1111/1365-2435.12300. | Find with Google Scholar »The Adaptive Significance of Provisioning and Foraging Coordination between Breeding Partners
Mariette MM, Griffith SC, 2015. The Adaptive Significance of Provisioning and Foraging Coordination between Breeding Partners. American Naturalist 185:270-280. doi: 10.1086/679441. | Find with Google Scholar »Fauna and biostratigraphy of the Cambrian (Series 2, Stage 4; Ordian) Tempe Formation (Pertaoorrta Group), Amadeus Basin, Northern Territory
Smith PM, Brock GA, Paterson JR, 2015. Fauna and biostratigraphy of the Cambrian (Series 2, Stage 4; Ordian) Tempe Formation (Pertaoorrta Group), Amadeus Basin, Northern Territory. Alcheringa 39:40-70. doi: 10.1080/03115518.2014.951917. | Find with Google Scholar »